Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | EXZ48_22000 | Not Available | Negative | 4671747 - 4673003 | 42846.5 |
| arac family transcriptional regulator | EXZ48_22005 | Not Available | Positive | 4673111 - 4674109 | 36529.0 |
| pentapeptide repeat-containing protein | EXZ48_22010 | Not Available | Positive | 4674320 - 4675009 | 24664.1 |
| tonb-dependent receptor | EXZ48_22015 | Not Available | Positive | 4675364 - 4677610 | 82115.1 |
| iron-siderophore abc transporter substrate-binding protein | EXZ48_22020 | Not Available | Positive | 4677665 - 4678600 | 33998.8 |
| iron abc transporter permease | EXZ48_22025 | Not Available | Positive | 4678707 - 4679642 | 31458.9 |
| iron abc transporter permease | EXZ48_22030 | Not Available | Positive | 4679639 - 4680625 | 33838.8 |
| abc transporter atp-binding protein | EXZ48_22035 | Not Available | Positive | 4680612 - 4681409 | 28606.9 |
| rna polymerase sigma factor | EXZ48_22040 | Not Available | Positive | 4681688 - 4682239 | 20768.4 |
| fecr family protein | EXZ48_22045 | Not Available | Positive | 4682302 - 4683252 | 34066.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
