Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fad-dependent oxidoreductase | EXZ48_21950 | Not Available | Positive | 4660125 - 4662932 | 100428.0 |
| hypothetical protein | EXZ48_21955 | Not Available | Positive | 4662925 - 4663473 | 19442.3 |
| branched-chain amino acid abc transporter substrate-binding protein | EXZ48_21960 | Not Available | Positive | 4663532 - 4664647 | 39139.3 |
| c-type cytochrome | EXZ48_21965 | Not Available | Negative | 4664767 - 4665147 | 13197.1 |
| gmc family oxidoreductase | EXZ48_21970 | Not Available | Negative | 4665268 - 4666839 | 56854.9 |
| gluconate 2-dehydrogenase subunit 3 family protein | EXZ48_21975 | Not Available | Negative | 4666920 - 4667450 | 19558.2 |
| lactoylglutathione lyase | EXZ48_21980 | Not Available | Negative | 4667507 - 4667902 | 14757.3 |
| dna-binding protein | EXZ48_21985 | Not Available | Positive | 4668115 - 4668423 | 11017.0 |
| oxidoreductase | EXZ48_21990 | Not Available | Negative | 4668588 - 4669742 | 42266.0 |
| tonb-dependent receptor | EXZ48_21995 | Not Available | Negative | 4669753 - 4671750 | 72979.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
