Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | EXZ48_21900 | Not Available | Positive | 4648263 - 4649099 | 29553.8 |
| abc transporter atp-binding protein | EXZ48_21905 | Not Available | Positive | 4649096 - 4650094 | 35584.5 |
| dipeptide abc transporter atp-binding protein | EXZ48_21910 | Not Available | Positive | 4650091 - 4651125 | 37837.1 |
| coa transferase | EXZ48_21915 | Not Available | Positive | 4651122 - 4652381 | 45033.9 |
| 3-hydroxyacyl-coa dehydrogenase | EXZ48_21920 | Not Available | Positive | 4652425 - 4654377 | 68760.5 |
| nad-dependent succinate-semialdehyde dehydrogenase | EXZ48_21925 | Not Available | Positive | 4654397 - 4655833 | 50701.9 |
| cyth and chad domain-containing protein | EXZ48_21930 | Not Available | Positive | 4656104 - 4657543 | 53215.6 |
| tetr/acrr family transcriptional regulator | EXZ48_21935 | Not Available | Positive | 4657762 - 4658364 | 23199.8 |
| sarcosine oxidase subunit beta family protein | EXZ48_21940 | Not Available | Positive | 4658596 - 4659849 | 44974.0 |
| sarcosine oxidase subunit delta | EXZ48_21945 | Not Available | Positive | 4659860 - 4660144 | 10579.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
