Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class iv aminotransferase | EXZ48_21850 | Not Available | Negative | 4635506 - 4636480 | 36378.6 |
| aminotransferase class iii-fold pyridoxal phosphate-dependent enzyme | EXZ48_21855 | Not Available | Negative | 4636560 - 4637804 | 44540.0 |
| abc transporter substrate-binding protein | EXZ48_21860 | Not Available | Negative | 4637857 - 4639455 | 57237.9 |
| mfs transporter | EXZ48_21865 | Not Available | Negative | 4639501 - 4641675 | 77935.2 |
| acyl-coa dehydrogenase | EXZ48_21870 | Not Available | Positive | 4641824 - 4642963 | 40993.4 |
| four-carbon acid sugar kinase family protein | EXZ48_21875 | Not Available | Positive | 4642973 - 4644241 | 44012.1 |
| class ii aldolase/adducin family protein | EXZ48_21880 | Not Available | Positive | 4644238 - 4644885 | 22783.4 |
| acetoin dehydrogenase dihydrolipoyllysine-residue acetyltransferase subunit | EXZ48_21885 | Not Available | Negative | 4644889 - 4646178 | 45404.6 |
| iclr family transcriptional regulator | EXZ48_21890 | Not Available | Negative | 4646203 - 4647060 | 30708.8 |
| abc transporter permease | EXZ48_21895 | Not Available | Positive | 4647245 - 4648258 | 36537.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
