Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| plasmid partitioning protein repa | EXZ48_21800 | Not Available | Negative | 4623318 - 4624541 | 45084.4 |
| atp-binding protein | EXZ48_21805 | Not Available | Negative | 4624779 - 4626032 | 46223.0 |
| carbohydrate kinase family protein | EXZ48_21810 | Not Available | Negative | 4626269 - 4627291 | 36398.5 |
| hypothetical protein | EXZ48_21815 | Not Available | Negative | 4627288 - 4628319 | 37808.9 |
| sugar abc transporter atp-binding protein | EXZ48_21820 | Not Available | Negative | 4628343 - 4629110 | 27265.5 |
| abc transporter permease | EXZ48_21825 | Not Available | Negative | 4629110 - 4630102 | 34389.3 |
| sugar abc transporter substrate-binding protein | EXZ48_21830 | Not Available | Negative | 4630190 - 4631179 | 33776.2 |
| carbohydrate kinase | EXZ48_21835 | Not Available | Negative | 4631337 - 4632932 | 56543.6 |
| rok family transcriptional regulator | EXZ48_21840 | Not Available | Positive | 4633061 - 4634296 | 43482.7 |
| sensor histidine kinase | EXZ48_21845 | Not Available | Positive | 4634682 - 4635467 | 28935.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
