Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2794 domain-containing protein | EXZ48_21745 | Not Available | Negative | 4612398 - 4612772 | 14393.4 |
| duf1223 domain-containing protein | EXZ48_21750 | Not Available | Negative | 4613182 - 4613949 | 27856.5 |
| atp-binding protein | EXZ48_21755 | Not Available | Positive | 4614307 - 4614621 | 11907.4 |
| amino acid permease | EXZ48_21765 | Not Available | Positive | 4615207 - 4616703 | 52603.6 |
| iron-containing alcohol dehydrogenase | EXZ48_21770 | Not Available | Positive | 4616751 - 4617944 | 41904.6 |
| integrase | EXZ48_21775 | Not Available | Positive | 4618095 - 4619207 | 40553.1 |
| hypothetical protein | EXZ48_21780 | Not Available | Positive | 4619330 - 4619797 | 16717.6 |
| hypothetical protein | EXZ48_21785 | Not Available | Positive | 4620289 - 4620606 | 11386.4 |
| replication initiation protein repc | EXZ48_21790 | Not Available | Negative | 4620890 - 4622104 | 44331.5 |
| plasmid partitioning protein repb | EXZ48_21795 | Not Available | Negative | 4622302 - 4623321 | 36599.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
