Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | EXZ48_21695 | Not Available | Negative | 4588698 - 4589558 | 31046.4 |
| putative sulfate exporter family transporter | EXZ48_21700 | Not Available | Positive | 4589637 - 4590671 | 35132.8 |
| methionine synthase | EXZ48_21705 | Not Available | Negative | 4590678 - 4594469 | 138030.0 |
| hypothetical protein | EXZ48_21710 | Not Available | Negative | 4594553 - 4594762 | 7676.31 |
| protein ndvb | EXZ48_21715 | Not Available | Positive | 4595521 - 4604022 | 316743.0 |
| hypothetical protein | EXZ48_21720 | Not Available | Positive | 4604048 - 4605217 | 43240.5 |
| glucan abc transporter atp-binding protein/ permease | EXZ48_21725 | Not Available | Negative | 4605225 - 4606982 | 63860.3 |
| luxr family transcriptional regulator | EXZ48_21730 | Not Available | Positive | 4607284 - 4608024 | 27952.0 |
| pyruvate carboxylase | EXZ48_21735 | Not Available | Positive | 4608242 - 4611700 | 126308.0 |
| n-acetyltransferase family protein | EXZ48_21740 | Not Available | Positive | 4611842 - 4612393 | 19804.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
