Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | EXZ48_21595 | Not Available | Positive | 4568590 - 4569660 | 37692.9 |
| sugar abc transporter atp-binding protein | EXZ48_21600 | Not Available | Positive | 4569680 - 4571188 | 52868.5 |
| abc transporter permease | EXZ48_21605 | Not Available | Positive | 4571185 - 4572150 | 32552.2 |
| abc transporter permease | EXZ48_21610 | Not Available | Positive | 4572147 - 4573088 | 31888.8 |
| hydrolase | EXZ48_21615 | Not Available | Positive | 4573085 - 4574041 | 35035.7 |
| amino acid deaminase | EXZ48_21620 | Not Available | Positive | 4574034 - 4575347 | 45383.8 |
| rida family protein | EXZ48_21625 | Not Available | Positive | 4575375 - 4575719 | 12409.9 |
| deacylase | EXZ48_21630 | Not Available | Positive | 4575744 - 4576757 | 35609.8 |
| hypothetical protein | EXZ48_21635 | Not Available | Negative | 4576863 - 4578047 | 43157.6 |
| formyltetrahydrofolate deformylase | EXZ48_21640 | Not Available | Positive | 4578418 - 4579302 | 32965.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
