Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endonuclease | EXZ48_21545 | Not Available | Positive | 4560732 - 4561592 | 32064.3 |
| n-acetyltransferase | EXZ48_21550 | Not Available | Negative | 4561632 - 4562222 | 21823.9 |
| n-acetyltransferase | EXZ48_21555 | Not Available | Negative | 4562219 - 4562851 | 23751.7 |
| 50s ribosomal protein l27 | EXZ48_21560 | Not Available | Negative | 4562976 - 4563245 | 9371.19 |
| 50s ribosomal protein l21 | EXZ48_21565 | Not Available | Negative | 4563271 - 4563642 | 13029.8 |
| Trna-ser | Not Available | Not Available | Positive | 4563989 - 4564078 | Not Available |
| abc-f family atp-binding cassette domain-containing protein | EXZ48_21575 | Not Available | Positive | 4564194 - 4565816 | 60117.7 |
| cupin domain-containing protein | EXZ48_21580 | Not Available | Negative | 4565842 - 4566243 | 14229.6 |
| tigr03862 family flavoprotein | EXZ48_21585 | Not Available | Positive | 4566350 - 4567567 | 42309.0 |
| iclr family transcriptional regulator | EXZ48_21590 | Not Available | Negative | 4567578 - 4568360 | 28935.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
