Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna pyrophosphohydrolase | EXZ48_21495 | Not Available | Negative | 4550670 - 4551197 | 19813.6 |
| divergent polysaccharide deacetylase family protein | EXZ48_21500 | Not Available | Negative | 4551207 - 4552409 | 42255.8 |
| s41 family peptidase | EXZ48_21505 | Not Available | Negative | 4552593 - 4553915 | 47233.6 |
| hypothetical protein | EXZ48_21510 | Not Available | Negative | 4553905 - 4555335 | 52267.4 |
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | EXZ48_21515 | Not Available | Negative | 4555476 - 4555958 | 17253.1 |
| ribosome silencing factor | EXZ48_21520 | Not Available | Negative | 4556039 - 4556512 | 16960.2 |
| nicotinate-nucleotide adenylyltransferase | EXZ48_21525 | Not Available | Negative | 4556553 - 4557161 | 22557.3 |
| glutamate-5-semialdehyde dehydrogenase | EXZ48_21530 | Not Available | Negative | 4557198 - 4558475 | 44839.8 |
| glutamate 5-kinase | EXZ48_21535 | Not Available | Negative | 4558468 - 4559640 | 40544.9 |
| gtpase obge | EXZ48_21540 | Not Available | Negative | 4559642 - 4560652 | 35711.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
