Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | EXZ48_21395 | Not Available | Positive | 4526188 - 4527594 | 50180.7 |
| heparinase | EXZ48_21400 | Not Available | Positive | 4527711 - 4529393 | 62132.6 |
| bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase | EXZ48_21405 | Not Available | Positive | 4529496 - 4531106 | 56341.7 |
| mfs transporter | EXZ48_21410 | Not Available | Negative | 4531214 - 4532539 | 46422.6 |
| nad-glutamate dehydrogenase | EXZ48_21415 | Not Available | Negative | 4532789 - 4537570 | 174629.0 |
| pyridoxal kinase pdxy | EXZ48_21420 | Not Available | Positive | 4537847 - 4538722 | 31081.8 |
| carbonic anhydrase | EXZ48_21425 | Not Available | Positive | 4538818 - 4539459 | 23439.1 |
| lytic transglycosylase | EXZ48_21430 | Not Available | Negative | 4539610 - 4540431 | 28560.0 |
| aspartate-semialdehyde dehydrogenase | EXZ48_21435 | Not Available | Negative | 4540658 - 4541692 | 37601.8 |
| mfs transporter | EXZ48_21440 | Not Available | Positive | 4542184 - 4544073 | 66837.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
