Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| parb/repb/spo0j family partition protein | EXZ48_21345 | Not Available | Positive | 4513705 - 4514595 | 32782.0 |
| dna polymerase iii subunit delta | EXZ48_21350 | Not Available | Negative | 4514611 - 4515645 | 37253.1 |
| hypothetical protein | EXZ48_21355 | Not Available | Negative | 4515653 - 4516177 | 18514.2 |
| leucine--trna ligase | EXZ48_21360 | Not Available | Negative | 4516164 - 4518794 | 97740.1 |
| yggs family pyridoxal phosphate-dependent enzyme | EXZ48_21365 | Not Available | Positive | 4518993 - 4519652 | 23612.5 |
| propionyl-coa synthetase | EXZ48_21370 | Not Available | Positive | 4519785 - 4521689 | 68849.6 |
| duf1013 domain-containing protein | EXZ48_21375 | Not Available | Negative | 4521750 - 4522451 | 25960.8 |
| acetate--coa ligase | EXZ48_21380 | Not Available | Positive | 4522684 - 4524639 | 72446.4 |
| duf1674 domain-containing protein | EXZ48_21385 | Not Available | Negative | 4524817 - 4525014 | 7046.02 |
| zinc metalloprotease htpx | EXZ48_21390 | Not Available | Positive | 4525226 - 4526191 | 34586.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
