Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| shikimate dehydrogenase | EXZ48_21295 | Not Available | Negative | 4503111 - 4503968 | 30573.3 |
| maf-like protein | EXZ48_21300 | Not Available | Negative | 4503961 - 4504557 | 21293.8 |
| kinase/pyrophosphorylase | EXZ48_21305 | Not Available | Negative | 4504583 - 4505404 | 30227.5 |
| uroporphyrinogen decarboxylase | EXZ48_21310 | Not Available | Positive | 4505809 - 4506843 | 37017.7 |
| protoporphyrinogen oxidase hemj | EXZ48_21315 | Not Available | Positive | 4506840 - 4507379 | 20267.4 |
| transcription termination factor rho | EXZ48_21320 | Not Available | Positive | 4507566 - 4508831 | 47001.9 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | EXZ48_21325 | Not Available | Positive | 4508959 - 4510284 | 47445.3 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis enzyme mnmg | EXZ48_21330 | Not Available | Positive | 4510351 - 4512240 | 67979.3 |
| 16s rrna (guanine(527)-n(7))-methyltransferase rsmg | EXZ48_21335 | Not Available | Positive | 4512237 - 4512872 | 23545.4 |
| para family protein | EXZ48_21340 | Not Available | Positive | 4512886 - 4513680 | 28825.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
