Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitroreductase | EXZ48_21245 | Not Available | Positive | 4494477 - 4495070 | 21864.8 |
| dna topoisomerase (atp-hydrolyzing) subunit b | EXZ48_21250 | Not Available | Negative | 4495235 - 4497667 | 88655.4 |
| xre family transcriptional regulator | EXZ48_21255 | Not Available | Negative | 4497801 - 4498181 | 13986.8 |
| dna mismatch repair protein muts | EXZ48_21260 | Not Available | Negative | 4498178 - 4498753 | 21255.8 |
| transglycosylase | EXZ48_21265 | Not Available | Negative | 4498740 - 4499855 | 40130.7 |
| tim44/tima family putative adaptor protein | EXZ48_21270 | Not Available | Negative | 4499870 - 4500574 | 25710.1 |
| membrane protein fxsa | EXZ48_21275 | Not Available | Positive | 4500729 - 4501187 | 16652.2 |
| protein-export chaperone secb | EXZ48_21280 | Not Available | Positive | 4501257 - 4501733 | 17365.7 |
| dna polymerase iii subunit epsilon | EXZ48_21285 | Not Available | Negative | 4501817 - 4502521 | 25878.1 |
| dephospho-coa kinase | EXZ48_21290 | Not Available | Negative | 4502521 - 4503111 | 21599.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
