Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zinc-binding alcohol dehydrogenase family protein | EXZ48_21195 | Not Available | Negative | 4483468 - 4484484 | 35642.0 |
| abc transporter permease | EXZ48_21200 | Not Available | Negative | 4484486 - 4485460 | 34379.8 |
| sugar abc transporter atp-binding protein | EXZ48_21205 | Not Available | Negative | 4485489 - 4487042 | 56475.6 |
| abc transporter substrate-binding protein | EXZ48_21210 | Not Available | Negative | 4487131 - 4488117 | 33912.8 |
| ribose abc transporter | EXZ48_21215 | Not Available | Negative | 4488327 - 4488773 | 16245.8 |
| aldo/keto reductase | EXZ48_21220 | Not Available | Negative | 4488812 - 4489831 | 36593.3 |
| gntr family transcriptional regulator | EXZ48_21225 | Not Available | Positive | 4490026 - 4490904 | 33988.8 |
| mannitol dehydrogenase family protein | EXZ48_21230 | Not Available | Positive | 4490915 - 4492006 | 40114.1 |
| 2-keto-3-deoxy-l-rhamnonate aldolase | EXZ48_21235 | Not Available | Negative | 4492000 - 4492800 | 28098.8 |
| nadp-dependent succinate-semialdehyde dehydrogenase i | EXZ48_21240 | Not Available | Negative | 4492865 - 4494316 | 51349.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
