Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hamp domain-containing protein | EXZ48_21095 | Not Available | Positive | 4458192 - 4459982 | 65936.2 |
| hpr kinase/phosphorylase | EXZ48_21100 | Not Available | Positive | 4459979 - 4460434 | 15773.4 |
| pts sugar transporter subunit iia | EXZ48_21105 | Not Available | Positive | 4460585 - 4460986 | 14206.4 |
| hpr family phosphocarrier protein | EXZ48_21110 | Not Available | Positive | 4461002 - 4461274 | 9416.55 |
| adenosylhomocysteinase | EXZ48_21115 | Not Available | Positive | 4461431 - 4462831 | 50849.0 |
| pas domain-containing protein | EXZ48_21120 | Not Available | Positive | 4463122 - 4465575 | 89887.6 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsae | EXZ48_21125 | Not Available | Positive | 4465582 - 4467078 | 55537.1 |
| nucleotidyltransferase family protein | EXZ48_21130 | Not Available | Positive | 4467148 - 4467882 | 26130.6 |
| double-strand break repair protein addb | EXZ48_21135 | Not Available | Positive | 4467879 - 4471061 | 114273.0 |
| double-strand break repair helicase adda | EXZ48_21140 | Not Available | Positive | 4471054 - 4474611 | 128805.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
