Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| imidazole glycerol phosphate synthase subunit hish | EXZ48_21045 | Not Available | Positive | 4450035 - 4450676 | 23168.8 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase | EXZ48_21050 | Not Available | Positive | 4450678 - 4451412 | 25481.7 |
| imidazole glycerol phosphate synthase subunit hisf | EXZ48_21055 | Not Available | Positive | 4451519 - 4452295 | 27271.5 |
| phosphoribosyl-atp diphosphatase | EXZ48_21060 | Not Available | Positive | 4452306 - 4452626 | 11365.6 |
| type i pantothenate kinase | EXZ48_21065 | Not Available | Positive | 4452626 - 4453621 | 38146.6 |
| alpha-ketoglutarate-dependent dioxygenase alkb | EXZ48_21070 | Not Available | Negative | 4453627 - 4454244 | 22576.0 |
| peptidoglycan-binding protein lysm | EXZ48_21075 | Not Available | Negative | 4454269 - 4454781 | 18128.7 |
| aminoacyl-trna hydrolase | EXZ48_21080 | Not Available | Negative | 4454890 - 4455324 | 15994.3 |
| phosphoenolpyruvate carboxykinase | EXZ48_21085 | Not Available | Negative | 4455452 - 4457062 | 58184.1 |
| response regulator transcription factor | EXZ48_21090 | Not Available | Positive | 4457375 - 4458106 | 27275.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
