Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydantoinase/oxoprolinase family protein | EXZ48_20995 | Not Available | Negative | 4439993 - 4441999 | 69918.5 |
| hypothetical protein | EXZ48_21000 | Not Available | Positive | 4442140 - 4442694 | 20596.4 |
| cytochrome p450 | EXZ48_21005 | Not Available | Negative | 4442639 - 4444045 | 52954.2 |
| duf1402 family protein | EXZ48_21010 | Not Available | Negative | 4444158 - 4445138 | 35489.9 |
| atp-dependent protease atpase subunit hslu | EXZ48_21015 | Not Available | Negative | 4445282 - 4446592 | 47935.7 |
| n-acetyltransferase | EXZ48_21020 | Not Available | Negative | 4446606 - 4447100 | 18568.0 |
| atp-dependent protease subunit hslv | EXZ48_21025 | Not Available | Negative | 4447087 - 4447647 | 20281.3 |
| imidazoleglycerol-phosphate dehydratase hisb | EXZ48_21030 | Not Available | Positive | 4448845 - 4449438 | 21336.2 |
| hypothetical protein | EXZ48_21035 | Not Available | Positive | 4449342 - 4449584 | 8860.51 |
| duf2628 domain-containing protein | EXZ48_21040 | Not Available | Positive | 4449563 - 4450033 | 17030.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
