Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ldh family oxidoreductase | EXZ48_20930 | Not Available | Positive | 4425983 - 4427020 | 36102.4 |
| Trna-ala | Not Available | Not Available | Positive | 4428606 - 4428681 | Not Available |
| Trna-ile | Not Available | Not Available | Positive | 4428727 - 4428803 | Not Available |
| hypothetical protein | EXZ48_20960 | Not Available | Positive | 4430913 - 4431173 | 9411.63 |
| atp-dependent helicase hrpb | EXZ48_20965 | Not Available | Positive | 4431175 - 4433643 | 88516.8 |
| acts/prrb/regb family redox-sensitive histidine kinase | EXZ48_20970 | Not Available | Positive | 4433865 - 4435166 | 47309.6 |
| actr/prra/rega family redox response regulator transcription factor | EXZ48_20975 | Not Available | Positive | 4435244 - 4435813 | 20874.0 |
| dna repair protein mmcb-related protein | EXZ48_20980 | Not Available | Negative | 4435977 - 4436507 | 19768.8 |
| l,d-transpeptidase | EXZ48_20985 | Not Available | Positive | 4436876 - 4437538 | 24116.1 |
| malate synthase g | EXZ48_20990 | Not Available | Negative | 4437645 - 4439807 | 78730.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
