Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deoxyribose-phosphate aldolase | EXZ48_20830 | Not Available | Negative | 4407445 - 4408221 | 26392.7 |
| purine-nucleoside phosphorylase | EXZ48_20835 | Not Available | Negative | 4408214 - 4409026 | 28127.1 |
| cytidine deaminase | EXZ48_20840 | Not Available | Negative | 4409023 - 4409415 | 13985.0 |
| abc transporter permease | EXZ48_20845 | Not Available | Negative | 4409419 - 4410390 | 34435.8 |
| abc transporter permease | EXZ48_20850 | Not Available | Negative | 4410394 - 4411527 | 40432.7 |
| abc transporter atp-binding protein | EXZ48_20855 | Not Available | Negative | 4411524 - 4413059 | 55864.1 |
| hypothetical protein | EXZ48_20860 | Not Available | Positive | 4413215 - 4413448 | 8969.59 |
| bmp family abc transporter substrate-binding protein | EXZ48_20865 | Not Available | Negative | 4413512 - 4414504 | 35011.8 |
| peptide-methionine (s)-s-oxide reductase msra | EXZ48_20870 | Not Available | Negative | 4414723 - 4415373 | 23249.8 |
| hypothetical protein | EXZ48_20875 | Not Available | Negative | 4415456 - 4415773 | 11310.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
