Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase | EXZ48_20780 | Not Available | Negative | 4399521 - 4400027 | 17447.0 |
| flp family type ivb pilin | EXZ48_20785 | Not Available | Negative | 4400187 - 4400366 | 5972.37 |
| pilus assembly protein pilq | EXZ48_20790 | Not Available | Positive | 4400690 - 4401103 | 14770.8 |
| pilus assembly protein | EXZ48_20795 | Not Available | Positive | 4401228 - 4401818 | 22066.8 |
| pilus assembly protein | EXZ48_20800 | Not Available | Positive | 4401824 - 4402429 | 21453.1 |
| phosphopentomutase | EXZ48_20805 | Not Available | Positive | 4402549 - 4403778 | 44107.4 |
| adenosine deaminase | EXZ48_20810 | Not Available | Positive | 4403775 - 4404743 | 35332.9 |
| uracil phosphoribosyltransferase | EXZ48_20815 | Not Available | Positive | 4404849 - 4405478 | 23145.1 |
| tigr02281 family clan aa aspartic protease | EXZ48_20820 | Not Available | Positive | 4405604 - 4406140 | 18872.8 |
| thymidine phosphorylase | EXZ48_20825 | Not Available | Negative | 4406130 - 4407443 | 45061.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
