Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| marr family transcriptional regulator | EXZ48_20730 | Not Available | Negative | 4388540 - 4388890 | 13010.0 |
| leucyl aminopeptidase family protein | EXZ48_20735 | Not Available | Negative | 4388958 - 4390349 | 49808.0 |
| tetratricopeptide repeat protein | EXZ48_20740 | Not Available | Positive | 4390485 - 4391300 | 29007.5 |
| type ii secretion system f family protein | EXZ48_20745 | Not Available | Negative | 4391444 - 4392427 | 36341.9 |
| type ii secretion system f family protein | EXZ48_20750 | Not Available | Negative | 4392439 - 4393449 | 36852.7 |
| cpaf family protein | EXZ48_20755 | Not Available | Negative | 4393459 - 4394931 | 53601.5 |
| ctpf protein | EXZ48_20760 | Not Available | Negative | 4394968 - 4396251 | 46387.0 |
| pilus assembly protein cpad | EXZ48_20765 | Not Available | Negative | 4396314 - 4397030 | 25961.0 |
| type ii and iii secretion system protein family protein | EXZ48_20770 | Not Available | Negative | 4397042 - 4398544 | 53117.5 |
| flp pilus assembly protein cpab | EXZ48_20775 | Not Available | Negative | 4398604 - 4399410 | 28019.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
