Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | EXZ48_20680 | Not Available | Negative | 4376021 - 4377817 | 64970.6 |
| glucokinase | EXZ48_20685 | Not Available | Negative | 4377938 - 4378963 | 36443.8 |
| methylglyoxal synthase | EXZ48_20690 | Not Available | Negative | 4379014 - 4379394 | 13495.6 |
| penicillin-insensitive murein endopeptidase | EXZ48_20695 | Not Available | Negative | 4379498 - 4380553 | 37972.8 |
| abc transporter substrate-binding protein | EXZ48_20700 | Not Available | Positive | 4380751 - 4382601 | 69708.0 |
| microcin c abc transporter permease yejb | EXZ48_20705 | Not Available | Positive | 4382755 - 4383831 | 40107.2 |
| abc transporter permease | EXZ48_20710 | Not Available | Positive | 4383831 - 4384970 | 42002.4 |
| abc transporter atp-binding protein | EXZ48_20715 | Not Available | Positive | 4384967 - 4386601 | 59727.4 |
| glyoxylate/hydroxypyruvate reductase a | EXZ48_20720 | Not Available | Positive | 4386675 - 4387634 | 34925.0 |
| peptidase p60 | EXZ48_20725 | Not Available | Negative | 4387662 - 4388516 | 30484.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
