Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gntr family transcriptional regulator | EXZ48_20630 | Not Available | Positive | 4367138 - 4367803 | 25380.1 |
| methyl-accepting chemotaxis protein | EXZ48_20635 | Not Available | Negative | 4367923 - 4369974 | 72171.6 |
| sulfate transporter family protein | EXZ48_20640 | Not Available | Positive | 4370129 - 4370854 | 26143.0 |
| glyoxalase | EXZ48_20645 | Not Available | Negative | 4370837 - 4371262 | 15764.8 |
| tetr/acrr family transcriptional regulator | EXZ48_20650 | Not Available | Positive | 4371404 - 4371976 | 20293.1 |
| endonuclease iii | EXZ48_20655 | Not Available | Negative | 4371966 - 4372721 | 28247.6 |
| duf2244 domain-containing protein | EXZ48_20660 | Not Available | Positive | 4372797 - 4373297 | 18503.5 |
| methylated-dna--[protein]-cysteine s-methyltransferase | EXZ48_20665 | Not Available | Positive | 4373423 - 4374295 | 31841.0 |
| 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase | EXZ48_20670 | Not Available | Negative | 4374407 - 4375042 | 23342.9 |
| 4-hydroxy-tetrahydrodipicolinate reductase | EXZ48_20675 | Not Available | Negative | 4375122 - 4375940 | 27894.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
