Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | EXZ48_20580 | Not Available | Negative | 4355699 - 4356976 | 44421.4 |
| fadr family transcriptional regulator | EXZ48_20585 | Not Available | Negative | 4356973 - 4357650 | 23978.8 |
| aminopeptidase p family protein | EXZ48_20590 | Not Available | Negative | 4357768 - 4359573 | 65770.2 |
| atp-binding cassette domain-containing protein | EXZ48_20595 | Not Available | Negative | 4359607 - 4360602 | 35494.4 |
| abc transporter atp-binding protein | EXZ48_20600 | Not Available | Negative | 4360599 - 4361642 | 37366.8 |
| abc transporter permease | EXZ48_20605 | Not Available | Negative | 4361605 - 4362471 | 30924.5 |
| abc transporter permease | EXZ48_20610 | Not Available | Negative | 4362468 - 4363409 | 33975.9 |
| abc transporter substrate-binding protein | EXZ48_20615 | Not Available | Negative | 4363491 - 4365068 | 56546.9 |
| cupin domain-containing protein | EXZ48_20620 | Not Available | Positive | 4365266 - 4365910 | 23496.1 |
| hypothetical protein | EXZ48_20625 | Not Available | Negative | 4365916 - 4366947 | 36938.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
