Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphomannomutase | EXZ48_20530 | Not Available | Positive | 4346798 - 4348228 | 48639.3 |
| Trna-leu | Not Available | Not Available | Positive | 4348365 - 4348451 | Not Available |
| hpp family protein | EXZ48_20540 | Not Available | Positive | 4348638 - 4349789 | 39856.8 |
| nadp-specific glutamate dehydrogenase | EXZ48_20545 | Not Available | Positive | 4349879 - 4351234 | 48849.4 |
| hypothetical protein | EXZ48_20550 | Not Available | Negative | 4351252 - 4351758 | 17858.6 |
| nucleoside diphosphate kinase regulator | EXZ48_20555 | Not Available | Negative | 4351938 - 4352363 | 15048.1 |
| carbonic anhydrase | EXZ48_20560 | Not Available | Positive | 4352725 - 4353360 | 23384.9 |
| duf488 domain-containing protein | EXZ48_20565 | Not Available | Positive | 4353332 - 4353679 | 13363.8 |
| cystathionine gamma-synthase | EXZ48_20570 | Not Available | Positive | 4353798 - 4354964 | 40574.8 |
| 5-formyltetrahydrofolate cyclo-ligase | EXZ48_20575 | Not Available | Positive | 4355022 - 4355735 | 26113.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
