Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar abc transporter substrate-binding protein | EXZ48_20480 | Not Available | Positive | 4338979 - 4340001 | 35068.9 |
| abc transporter permease | EXZ48_20485 | Not Available | Positive | 4340259 - 4341341 | 37870.0 |
| sugar abc transporter atp-binding protein | EXZ48_20490 | Not Available | Positive | 4341341 - 4342120 | 28183.6 |
| nucleoside triphosphate hydrolase | EXZ48_20495 | Not Available | Positive | 4342117 - 4342740 | 23406.2 |
| dihydroorotase | EXZ48_20500 | Not Available | Positive | 4342857 - 4343897 | 38021.9 |
| crp/fnr family transcriptional regulator | EXZ48_20505 | Not Available | Negative | 4343953 - 4344714 | 28422.4 |
| hypothetical protein | EXZ48_20510 | Not Available | Positive | 4344901 - 4345299 | 14896.1 |
| doxx family protein | EXZ48_20515 | Not Available | Negative | 4345290 - 4345739 | 15919.7 |
| selt/selw/selh family protein | EXZ48_20520 | Not Available | Positive | 4345919 - 4346221 | 11044.2 |
| ba14k family protein | EXZ48_20525 | Not Available | Negative | 4346274 - 4346669 | 15532.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
