Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | EXZ48_20430 | Not Available | Positive | 4328502 - 4329752 | 43995.4 |
| elongation factor 4 | EXZ48_20435 | Not Available | Positive | 4329814 - 4331646 | 67501.8 |
| flagellar basal body rod protein | EXZ48_20440 | Not Available | Negative | 4331683 - 4331913 | 8008.44 |
| f0f1 atp synthase subunit a | EXZ48_20445 | Not Available | Negative | 4332019 - 4332765 | 27078.1 |
| class i sam-dependent methyltransferase | EXZ48_20450 | Not Available | Negative | 4332973 - 4333602 | 22677.3 |
| pyridoxamine 5'-phosphate oxidase family protein | EXZ48_20455 | Not Available | Negative | 4333680 - 4334396 | 26361.8 |
| plp-dependent aminotransferase family protein | EXZ48_20460 | Not Available | Positive | 4334440 - 4335870 | 50375.7 |
| type 1 glutamine amidotransferase | EXZ48_20465 | Not Available | Negative | 4335890 - 4336615 | 25432.0 |
| transporter | EXZ48_20470 | Not Available | Negative | 4337031 - 4337459 | 15747.2 |
| rok family transcriptional regulator | EXZ48_20475 | Not Available | Negative | 4337460 - 4338689 | 43828.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
