Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phenylalanine--trna ligase subunit beta | EXZ48_20380 | Not Available | Negative | 4319484 - 4321910 | 85723.1 |
| phenylalanine--trna ligase subunit alpha | EXZ48_20385 | Not Available | Negative | 4321934 - 4323016 | 39996.6 |
| serine/threonine protein phosphatase | EXZ48_20390 | Not Available | Negative | 4323009 - 4323872 | 31543.3 |
| 50s ribosomal protein l20 | EXZ48_20395 | Not Available | Negative | 4323974 - 4324378 | 15001.2 |
| 50s ribosomal protein l35 | EXZ48_20400 | Not Available | Negative | 4324418 - 4324621 | 7357.33 |
| translation initiation factor if-3 | EXZ48_20405 | Not Available | Negative | 4324841 - 4325377 | 20321.0 |
| alpha/beta hydrolase | EXZ48_20410 | Not Available | Positive | 4325610 - 4326428 | 28620.1 |
| transglutaminase | EXZ48_20415 | Not Available | Positive | 4326537 - 4327154 | 22118.4 |
| gnat family n-acetyltransferase | EXZ48_20420 | Not Available | Negative | 4327231 - 4327767 | 19098.9 |
| xre family transcriptional regulator | EXZ48_20425 | Not Available | Negative | 4327782 - 4328360 | 20791.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
