Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase | EXZ48_20330 | Not Available | Positive | 4310816 - 4311805 | 36499.1 |
| class i sam-dependent methyltransferase | EXZ48_20335 | Not Available | Positive | 4311823 - 4312530 | 26699.9 |
| transporter | EXZ48_20340 | Not Available | Positive | 4312527 - 4312892 | 12622.0 |
| xre family transcriptional regulator | EXZ48_20345 | Not Available | Negative | 4312899 - 4313672 | 27915.6 |
| hypothetical protein | EXZ48_20350 | Not Available | Positive | 4313800 - 4314210 | 13680.2 |
| histone deacetylase family protein | EXZ48_20355 | Not Available | Positive | 4314364 - 4315389 | 36308.9 |
| eama family transporter | EXZ48_20360 | Not Available | Positive | 4315532 - 4316422 | 30113.8 |
| ompa family protein | EXZ48_20365 | Not Available | Positive | 4316501 - 4317163 | 23019.6 |
| lipo-like protein | EXZ48_20370 | Not Available | Negative | 4317191 - 4318003 | 30497.7 |
| rubrerythrin family protein | EXZ48_20375 | Not Available | Positive | 4318237 - 4319220 | 35973.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
