Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| coa transferase subunit b | EXZ48_20280 | Not Available | Positive | 4300240 - 4300929 | 24453.3 |
| 3-oxoadipyl-coa thiolase | EXZ48_20285 | Not Available | Positive | 4301031 - 4302236 | 41566.0 |
| cys-trna(pro) deacylase | EXZ48_20290 | Not Available | Positive | 4302536 - 4303009 | 16433.0 |
| aminopeptidase | EXZ48_20295 | Not Available | Positive | 4303078 - 4304331 | 44593.6 |
| pyrroline-5-carboxylate reductase | EXZ48_20300 | Not Available | Positive | 4304328 - 4305116 | 28052.5 |
| eama family transporter | EXZ48_20305 | Not Available | Negative | 4305067 - 4305981 | 31683.7 |
| marr family transcriptional regulator | EXZ48_20310 | Not Available | Positive | 4306065 - 4306547 | 17842.6 |
| flavodoxin family protein | EXZ48_20315 | Not Available | Negative | 4306607 - 4307197 | 22227.9 |
| exodeoxyribonuclease vii large subunit | EXZ48_20320 | Not Available | Negative | 4307205 - 4308791 | 57252.9 |
| hypothetical protein | EXZ48_20325 | Not Available | Negative | 4308872 - 4310635 | 61790.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
