Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family oxidoreductase | EXZ48_20180 | Not Available | Positive | 4281422 - 4282180 | 26070.4 |
| cupin domain-containing protein | EXZ48_20185 | Not Available | Negative | 4282567 - 4283100 | 20772.5 |
| thiamine pyrophosphate-requiring protein | EXZ48_20190 | Not Available | Negative | 4283124 - 4284845 | 60461.1 |
| abc transporter atp-binding protein | EXZ48_20195 | Not Available | Negative | 4284997 - 4285713 | 25090.5 |
| abc transporter atp-binding protein | EXZ48_20200 | Not Available | Negative | 4285694 - 4286458 | 27366.3 |
| branched-chain amino acid abc transporter permease | EXZ48_20205 | Not Available | Negative | 4286455 - 4287450 | 34235.6 |
| branched-chain amino acid abc transporter permease | EXZ48_20210 | Not Available | Negative | 4287462 - 4288325 | 30449.3 |
| abc transporter substrate-binding protein | EXZ48_20215 | Not Available | Negative | 4288515 - 4289687 | 40810.5 |
| 3-carboxy-cis,cis-muconate cycloisomerase | EXZ48_20220 | Not Available | Negative | 4289827 - 4290882 | 36690.5 |
| protocatechuate 3,4-dioxygenase subunit alpha | EXZ48_20225 | Not Available | Negative | 4291078 - 4291692 | 22260.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
