Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate/tyrosine/aromatic aminotransferase | EXZ48_20130 | Not Available | Positive | 4271931 - 4273100 | 41547.1 |
| yitt family protein | EXZ48_20135 | Not Available | Positive | 4273108 - 4273728 | 22141.6 |
| arsc family reductase | EXZ48_20140 | Not Available | Positive | 4273808 - 4274152 | 12663.3 |
| helix-turn-helix domain-containing protein | EXZ48_20145 | Not Available | Negative | 4274156 - 4275055 | 32327.3 |
| twin-arginine translocation pathway signal protein | EXZ48_20150 | Not Available | Positive | 4275239 - 4276465 | 43852.9 |
| branched-chain amino acid abc transporter permease | EXZ48_20155 | Not Available | Positive | 4276722 - 4277594 | 30282.3 |
| branched-chain amino acid abc transporter permease | EXZ48_20160 | Not Available | Positive | 4277591 - 4278514 | 32996.6 |
| abc transporter atp-binding protein | EXZ48_20165 | Not Available | Positive | 4278511 - 4279239 | 25427.1 |
| abc transporter atp-binding protein | EXZ48_20170 | Not Available | Positive | 4279232 - 4279945 | 24977.6 |
| aldehyde dehydrogenase | EXZ48_20175 | Not Available | Positive | 4279967 - 4281418 | 50252.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
