Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1513 domain-containing protein | EXZ48_20080 | Not Available | Positive | 4261682 - 4262785 | 39293.4 |
| paai family thioesterase | EXZ48_20085 | Not Available | Positive | 4262919 - 4263368 | 16046.3 |
| 5'-methylthioadenosine/s-adenosylhomocysteine nucleosidase | EXZ48_20090 | Not Available | Positive | 4263365 - 4264009 | 22659.3 |
| glutamine-hydrolyzing gmp synthase | EXZ48_20095 | Not Available | Positive | 4264063 - 4265625 | 57167.8 |
| cmla/flor family chloramphenicol efflux mfs transporter | EXZ48_20100 | Not Available | Positive | 4265761 - 4266954 | 41611.1 |
| methylated-dna--[protein]-cysteine s-methyltransferase | EXZ48_20105 | Not Available | Negative | 4266994 - 4267554 | 19293.9 |
| peptidase m14 | EXZ48_20110 | Not Available | Positive | 4267710 - 4268768 | 38196.2 |
| phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase family protein | EXZ48_20115 | Not Available | Positive | 4268936 - 4270396 | 52998.2 |
| endonuclease/exonuclease/phosphatase family protein | EXZ48_20120 | Not Available | Negative | 4270368 - 4271192 | 30012.3 |
| lrp/asnc family transcriptional regulator | EXZ48_20125 | Not Available | Negative | 4271303 - 4271782 | 17944.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
