Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sn-glycerol-3-phosphate abc transporter permease ugpe | EXZ48_19980 | Not Available | Negative | 4241780 - 4242622 | 31659.5 |
| abc transporter permease subunit | EXZ48_19985 | Not Available | Negative | 4242636 - 4243517 | 32801.7 |
| extracellular solute-binding protein | EXZ48_19990 | Not Available | Negative | 4243688 - 4244986 | 47361.8 |
| yran family protein | EXZ48_19995 | Not Available | Negative | 4245090 - 4245458 | 13963.0 |
| 16s rrna (cytidine(1402)-2'-o)-methyltransferase | EXZ48_20000 | Not Available | Negative | 4245448 - 4246374 | 32439.8 |
| dna polymerase iii subunit beta | EXZ48_20005 | Not Available | Positive | 4246609 - 4247727 | 40492.4 |
| methyltransferase domain-containing protein | EXZ48_20010 | Not Available | Positive | 4247941 - 4248543 | 22211.0 |
| histidine phosphatase family protein | EXZ48_20015 | Not Available | Positive | 4248553 - 4249134 | 20678.4 |
| orotidine-5'-phosphate decarboxylase | EXZ48_20020 | Not Available | Positive | 4249131 - 4249835 | 24603.3 |
| duf1330 domain-containing protein | EXZ48_20025 | Not Available | Positive | 4249857 - 4250144 | 10679.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
