Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gntr family transcriptional regulator | EXZ48_19925 | Not Available | Positive | 4231237 - 4231893 | 24264.9 |
| coa transferase | EXZ48_19930 | Not Available | Negative | 4231926 - 4233323 | 50243.5 |
| prpf family protein | EXZ48_19935 | Not Available | Negative | 4233320 - 4234474 | 40050.9 |
| sulfite exporter taue/safe family protein | EXZ48_19940 | Not Available | Negative | 4234503 - 4235240 | 26309.1 |
| winged helix-turn-helix domain-containing protein | EXZ48_19945 | Not Available | Positive | 4235431 - 4235737 | 11375.7 |
| is630 family transposase | EXZ48_19950 | Not Available | Positive | 4235665 - 4236219 | 21177.5 |
| hypothetical protein | EXZ48_19955 | Not Available | Negative | 4236165 - 4237337 | 43641.2 |
| glutathione synthase | EXZ48_19965 | Not Available | Negative | 4238646 - 4239590 | 35360.5 |
| endonuclease/exonuclease/phosphatase family protein | EXZ48_19970 | Not Available | Negative | 4239663 - 4240655 | 35890.0 |
| sn-glycerol-3-phosphate import atp-binding protein ugpc | EXZ48_19975 | Not Available | Negative | 4240652 - 4241767 | 39951.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
