Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitrate reductase cytochrome c-type subunit | EXZ48_19775 | Not Available | Positive | 4198028 - 4198519 | 18073.8 |
| cytochrome c | EXZ48_19780 | Not Available | Positive | 4198519 - 4199226 | 26266.6 |
| fadr family transcriptional regulator | EXZ48_19785 | Not Available | Negative | 4199243 - 4199965 | 25983.5 |
| sugar abc transporter permease yjff | EXZ48_19790 | Not Available | Negative | 4200053 - 4201021 | 33741.7 |
| abc transporter permease | EXZ48_19795 | Not Available | Negative | 4201018 - 4202043 | 35042.3 |
| sugar abc transporter atp-binding protein | EXZ48_19800 | Not Available | Negative | 4202040 - 4203560 | 55142.3 |
| abc transporter substrate-binding protein | EXZ48_19805 | Not Available | Negative | 4203665 - 4204627 | 34096.5 |
| gntr family transcriptional regulator | EXZ48_19810 | Not Available | Negative | 4205083 - 4205784 | 25866.3 |
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | EXZ48_19815 | Not Available | Positive | 4205972 - 4207006 | 36088.4 |
| tripartite tricarboxylate transporter substrate binding protein | EXZ48_19820 | Not Available | Positive | 4207077 - 4208069 | 34659.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
