Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate aminotransferase family protein | EXZ48_19725 | Not Available | Negative | 4186556 - 4187962 | 51317.8 |
| upf0261 family protein | EXZ48_19730 | Not Available | Positive | 4188542 - 4189798 | 43704.6 |
| had family hydrolase | EXZ48_19735 | Not Available | Positive | 4189795 - 4190448 | 24286.1 |
| aspartate aminotransferase family protein | EXZ48_19740 | Not Available | Positive | 4190460 - 4191818 | 48460.9 |
| aspartate aminotransferase family protein | EXZ48_19745 | Not Available | Positive | 4191820 - 4193103 | 45711.7 |
| homoserine kinase | EXZ48_19750 | Not Available | Positive | 4193108 - 4194097 | 36423.9 |
| periplasmic nitrate reductase, nape protein | EXZ48_19755 | Not Available | Positive | 4194625 - 4194792 | 6143.69 |
| ferredoxin-type protein napf | EXZ48_19760 | Not Available | Positive | 4194802 - 4195302 | 16725.2 |
| glutamate synthase | EXZ48_19765 | Not Available | Positive | 4195295 - 4195579 | 9969.91 |
| periplasmic nitrate reductase subunit alpha | EXZ48_19770 | Not Available | Positive | 4195554 - 4198058 | 93020.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
