Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator | EXZ48_19675 | Not Available | Negative | 4174409 - 4174738 | 12426.0 |
| mfs transporter | EXZ48_19680 | Not Available | Positive | 4174906 - 4176219 | 45955.3 |
| degq family serine endoprotease | EXZ48_19685 | Not Available | Negative | 4176346 - 4177857 | 51272.0 |
| d-alanyl-d-alanine carboxypeptidase | EXZ48_19690 | Not Available | Positive | 4178404 - 4179453 | 38041.5 |
| d-amino acid dehydrogenase | EXZ48_19695 | Not Available | Negative | 4179481 - 4180731 | 44674.3 |
| alanine racemase | EXZ48_19700 | Not Available | Negative | 4180759 - 4181892 | 39323.9 |
| lrp/asnc family transcriptional regulator | EXZ48_19705 | Not Available | Positive | 4182018 - 4182482 | 17138.9 |
| iclr family transcriptional regulator | EXZ48_19710 | Not Available | Negative | 4182498 - 4183247 | 26770.1 |
| apc family permease | EXZ48_19715 | Not Available | Positive | 4183517 - 4184968 | 50156.4 |
| aldehyde dehydrogenase | EXZ48_19720 | Not Available | Positive | 4185015 - 4186493 | 51726.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
