Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| extracellular solute-binding protein | EXZ48_19575 | Not Available | Positive | 4157957 - 4159072 | 40756.4 |
| abc transporter permease | EXZ48_19580 | Not Available | Positive | 4159138 - 4160082 | 33872.5 |
| abc transporter permease | EXZ48_19585 | Not Available | Positive | 4160079 - 4160879 | 28078.6 |
| histidinol dehydrogenase | EXZ48_19590 | Not Available | Positive | 4160918 - 4162246 | 47099.2 |
| dehydrogenase | EXZ48_19595 | Not Available | Positive | 4162251 - 4163264 | 34407.9 |
| histidine utilization repressor | EXZ48_19600 | Not Available | Positive | 4163317 - 4164048 | 27083.4 |
| hypothetical protein | EXZ48_19605 | Not Available | Positive | 4164074 - 4165366 | 47121.1 |
| alpha-hydroxy-acid oxidizing protein | EXZ48_19610 | Not Available | Positive | 4165368 - 4166525 | 41357.2 |
| rrf2 family transcriptional regulator | EXZ48_19615 | Not Available | Positive | 4166667 - 4167173 | 17659.6 |
| carboxymuconolactone decarboxylase family protein | EXZ48_19620 | Not Available | Positive | 4167208 - 4167660 | 16991.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
