Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | EXZ48_19520 | Not Available | Negative | 4146017 - 4147039 | 34535.6 |
| laci family transcriptional regulator | EXZ48_19525 | Not Available | Positive | 4147236 - 4148321 | 39397.2 |
| aldo/keto reductase | EXZ48_19530 | Not Available | Positive | 4148339 - 4149400 | 39073.6 |
| is5 family transposase | EXZ48_19535 | Not Available | Negative | 4149417 - 4150148 | 27448.4 |
| porin | EXZ48_19545 | Not Available | Positive | 4151049 - 4152104 | 38241.1 |
| response regulator transcription factor | EXZ48_19550 | Not Available | Positive | 4152268 - 4152945 | 25141.7 |
| hamp domain-containing histidine kinase | EXZ48_19555 | Not Available | Positive | 4152932 - 4154281 | 48249.9 |
| histidinol-phosphate transaminase | EXZ48_19560 | Not Available | Negative | 4154517 - 4155647 | 40355.4 |
| glucose 1-dehydrogenase | EXZ48_19565 | Not Available | Positive | 4155775 - 4156542 | 26609.8 |
| abc transporter atp-binding protein | EXZ48_19570 | Not Available | Positive | 4156791 - 4157924 | 41187.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
