Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class i sam-dependent methyltransferase | EXZ48_01055 | Not Available | Negative | 225966 - 226880 | 33648.4 |
| lysine--trna ligase | EXZ48_01060 | Not Available | Negative | 226993 - 228486 | 56512.5 |
| glutamate--trna ligase | EXZ48_01065 | Not Available | Negative | 228500 - 229969 | 54595.0 |
| slc13 family permease | EXZ48_01070 | Not Available | Negative | 230145 - 231917 | 62105.4 |
| terc family protein | EXZ48_01075 | Not Available | Negative | 232213 - 232965 | 26999.1 |
| tetr/acrr family transcriptional regulator | EXZ48_01080 | Not Available | Negative | 233112 - 233771 | 24452.5 |
| hlyd family secretion protein | EXZ48_01085 | Not Available | Positive | 233915 - 235117 | 41631.1 |
| dha2 family efflux mfs transporter permease subunit | EXZ48_01090 | Not Available | Positive | 235144 - 236736 | 57330.9 |
| metallophosphoesterase | EXZ48_01095 | Not Available | Positive | 236774 - 237913 | 41211.3 |
| laci family dna-binding transcriptional regulator | EXZ48_01100 | Not Available | Positive | 238002 - 239051 | 36016.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
