Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron abc transporter permease | EXZ48_19470 | Not Available | Positive | 4135035 - 4136069 | 36124.0 |
| abc transporter atp-binding protein | EXZ48_19475 | Not Available | Positive | 4136078 - 4136875 | 28888.0 |
| class i sam-dependent methyltransferase | EXZ48_19480 | Not Available | Negative | 4136847 - 4137545 | 25999.7 |
| purine permease | EXZ48_19485 | Not Available | Positive | 4138338 - 4139810 | 50666.5 |
| nucleoside deaminase | EXZ48_19490 | Not Available | Positive | 4139894 - 4140499 | 22772.8 |
| dihydroxyacetone kinase subunit l | EXZ48_19495 | Not Available | Negative | 4140626 - 4141267 | 22008.2 |
| dihydroxyacetone kinase subunit dhak | EXZ48_19500 | Not Available | Negative | 4141278 - 4142279 | 35386.4 |
| abc transporter permease | EXZ48_19505 | Not Available | Negative | 4142303 - 4143337 | 36503.0 |
| sugar abc transporter atp-binding protein | EXZ48_19510 | Not Available | Negative | 4143334 - 4144902 | 56004.0 |
| autoinducer 2 abc transporter substrate-binding protein | EXZ48_19515 | Not Available | Negative | 4144977 - 4145987 | 35352.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
