Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa dehydrogenase | EXZ48_19420 | Not Available | Negative | 4124533 - 4125744 | 44060.9 |
| llm class flavin-dependent oxidoreductase | EXZ48_19425 | Not Available | Positive | 4125987 - 4127402 | 52073.4 |
| hypothetical protein | EXZ48_19430 | Not Available | Positive | 4127545 - 4128612 | 38321.8 |
| hypothetical protein | EXZ48_19435 | Not Available | Positive | 4128647 - 4129270 | 23998.5 |
| hypothetical protein | EXZ48_19440 | Not Available | Positive | 4129263 - 4129955 | 25720.7 |
| iron abc transporter permease | EXZ48_19445 | Not Available | Positive | 4130006 - 4131004 | 34522.9 |
| abc transporter atp-binding protein | EXZ48_19450 | Not Available | Positive | 4130998 - 4131828 | 29746.0 |
| lysr family transcriptional regulator | EXZ48_19455 | Not Available | Negative | 4131866 - 4132804 | 33462.1 |
| abc transporter substrate-binding protein | EXZ48_19460 | Not Available | Positive | 4133031 - 4134014 | 35618.8 |
| iron abc transporter permease | EXZ48_19465 | Not Available | Positive | 4134034 - 4135038 | 34244.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
