Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid abc transporter permease | EXZ48_19320 | Not Available | Negative | 4102868 - 4103947 | 39223.0 |
| abc transporter permease subunit | EXZ48_19325 | Not Available | Negative | 4103944 - 4105143 | 41816.1 |
| amino acid abc transporter substrate-binding protein | EXZ48_19330 | Not Available | Negative | 4105143 - 4106174 | 37256.0 |
| abc transporter substrate-binding protein | EXZ48_19335 | Not Available | Positive | 4106666 - 4107700 | 37498.6 |
| abc transporter permease subunit | EXZ48_19340 | Not Available | Positive | 4107705 - 4108706 | 36049.7 |
| abc transporter atp-binding protein | EXZ48_19345 | Not Available | Positive | 4108706 - 4109491 | 28685.8 |
| hypothetical protein | EXZ48_19350 | Not Available | Positive | 4109481 - 4109780 | 10619.9 |
| bifunctional o-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase | EXZ48_19355 | Not Available | Positive | 4109808 - 4111169 | 48577.5 |
| monooxygenase | EXZ48_19360 | Not Available | Positive | 4111393 - 4112625 | 43921.5 |
| atp-binding cassette domain-containing protein | EXZ48_19365 | Not Available | Positive | 4112631 - 4113677 | 37192.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
