Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| extracellular solute-binding protein | EXZ48_19270 | Not Available | Positive | 4090242 - 4091660 | 51457.8 |
| hamp domain-containing protein | EXZ48_19275 | Not Available | Positive | 4091675 - 4093579 | 67489.2 |
| sigma-54-dependent fis family transcriptional regulator | EXZ48_19280 | Not Available | Positive | 4093576 - 4094904 | 48378.1 |
| extracellular solute-binding protein | EXZ48_19285 | Not Available | Positive | 4095065 - 4096384 | 46972.1 |
| iron abc transporter permease | EXZ48_19290 | Not Available | Positive | 4096511 - 4098223 | 61413.8 |
| abc transporter atp-binding protein | EXZ48_19295 | Not Available | Positive | 4098241 - 4099341 | 39404.7 |
| histidine phosphatase family protein | EXZ48_19300 | Not Available | Positive | 4099400 - 4100059 | 24417.9 |
| hypothetical protein | EXZ48_19305 | Not Available | Positive | 4100274 - 4100459 | 6558.0 |
| isopenicillin n synthase family oxygenase | EXZ48_19310 | Not Available | Positive | 4100456 - 4101496 | 38435.8 |
| fmnh2-dependent alkanesulfonate monooxygenase | EXZ48_19315 | Not Available | Negative | 4101605 - 4102774 | 41520.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
