Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yhfx family plp-dependent enzyme | EXZ48_19220 | Not Available | Positive | 4080089 - 4081303 | 42694.8 |
| sugar abc transporter atp-binding protein | EXZ48_19225 | Not Available | Positive | 4081300 - 4082061 | 27297.3 |
| glutathione s-transferase | EXZ48_19230 | Not Available | Negative | 4082071 - 4082700 | 23277.8 |
| arsr family transcriptional regulator | EXZ48_19235 | Not Available | Negative | 4082703 - 4083068 | 13432.4 |
| abc transporter | EXZ48_19240 | Not Available | Positive | 4083286 - 4084128 | 30378.1 |
| llm class flavin-dependent oxidoreductase | EXZ48_19245 | Not Available | Positive | 4084139 - 4085269 | 41678.9 |
| trap transporter large permease subunit | EXZ48_19250 | Not Available | Positive | 4085408 - 4087120 | 57732.8 |
| trap transporter substrate-binding protein | EXZ48_19255 | Not Available | Positive | 4087147 - 4088145 | 36031.9 |
| nad(p)-dependent alcohol dehydrogenase | EXZ48_19260 | Not Available | Negative | 4088221 - 4089234 | 35633.9 |
| lysr family transcriptional regulator | EXZ48_19265 | Not Available | Positive | 4089335 - 4090234 | 33756.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
