Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| urea abc transporter permease subunit urtc | EXZ48_19170 | Not Available | Negative | 4064620 - 4065783 | 42063.2 |
| urea abc transporter permease subunit urtb | EXZ48_19175 | Not Available | Negative | 4065780 - 4067411 | 57740.4 |
| urea abc transporter substrate-binding protein | EXZ48_19180 | Not Available | Negative | 4067689 - 4068981 | 46636.5 |
| response regulator | EXZ48_19185 | Not Available | Positive | 4069356 - 4072721 | 122502.0 |
| response regulator transcription factor | EXZ48_19190 | Not Available | Positive | 4072718 - 4073632 | 32720.3 |
| rok family transcriptional regulator | EXZ48_19195 | Not Available | Positive | 4074370 - 4075584 | 41626.9 |
| m20 family peptidase | EXZ48_19200 | Not Available | Positive | 4075581 - 4076840 | 44374.5 |
| laci family transcriptional regulator | EXZ48_19205 | Not Available | Positive | 4076870 - 4077931 | 36931.8 |
| laci family transcriptional regulator | EXZ48_19210 | Not Available | Positive | 4078004 - 4079062 | 37135.9 |
| abc transporter permease | EXZ48_19215 | Not Available | Positive | 4079100 - 4080077 | 33374.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
