Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | EXZ48_19115 | Not Available | Negative | 4051744 - 4053306 | 56834.9 |
| duf917 domain-containing protein | EXZ48_19120 | Not Available | Negative | 4053343 - 4054467 | 39489.0 |
| hydantoinase/oxoprolinase family protein | EXZ48_19125 | Not Available | Negative | 4054464 - 4056008 | 52768.4 |
| lrp/asnc family transcriptional regulator | EXZ48_19130 | Not Available | Negative | 4056012 - 4056527 | 18516.5 |
| 5-methyltetrahydropteroyltriglutamate-- homocysteine s-methyltransferase | EXZ48_19140 | Not Available | Positive | 4057549 - 4059900 | 86632.8 |
| lysr family transcriptional regulator argp | EXZ48_19145 | Not Available | Negative | 4060059 - 4060955 | 32746.5 |
| amino acid transporter | EXZ48_19150 | Not Available | Positive | 4061052 - 4061660 | 21402.6 |
| dihydrodipicolinate synthase family protein | EXZ48_19155 | Not Available | Positive | 4061683 - 4062579 | 31428.1 |
| urea abc transporter atp-binding subunit urte | EXZ48_19160 | Not Available | Negative | 4062799 - 4063494 | 25292.8 |
| urea abc transporter atp-binding protein urtd | EXZ48_19165 | Not Available | Negative | 4063850 - 4064614 | 27923.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
