Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease subunit | EXZ48_18995 | Not Available | Positive | 4029770 - 4030963 | 42094.7 |
| amino acid abc transporter permease | EXZ48_19000 | Not Available | Positive | 4030960 - 4032063 | 39503.2 |
| hypothetical protein | EXZ48_19005 | Not Available | Negative | 4032111 - 4032407 | 9997.67 |
| hypothetical protein | EXZ48_19010 | Not Available | Positive | 4032548 - 4032784 | 8564.26 |
| gntr family transcriptional regulator | EXZ48_19025 | Not Available | Positive | 4033406 - 4034233 | 31075.4 |
| acetyl-coa carboxylase biotin carboxylase subunit | EXZ48_19030 | Not Available | Negative | 4034563 - 4035927 | 48893.7 |
| acetyl-coa carboxylase biotin carboxyl carrier protein subunit | EXZ48_19035 | Not Available | Negative | 4035924 - 4036172 | 8357.98 |
| aminotransferase class iii-fold pyridoxal phosphate-dependent enzyme | EXZ48_19040 | Not Available | Negative | 4036196 - 4036687 | 17302.0 |
| zinc ribbon domain-containing protein | EXZ48_19050 | Not Available | Negative | 4037605 - 4037904 | 10830.2 |
| transporter | EXZ48_19055 | Not Available | Negative | 4038010 - 4038522 | 18587.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
